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LINKS.json
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{
"links": [
{
"url": "https://zhailab-sustech.github.io/jbrowse2/",
"img": "10.png",
"name": "Arabidopsis browser with nascent RNA sequencing data",
"pub": {
"doi": "https://doi.org/10.1186/s13059-021-02543-4",
"title": "Landscape of transcription termination in Arabidopsis revealed by single-molecule nascent RNA sequencing",
"year": 2021,
"citations": 15
},
"width": 1385,
"height": 618
},
{
"name": "Japanese rhinoceros beetle browser",
"pub": {
"title": "The draft genome sequence of Japanese rhinoceros beetle <i>Trypoxylus dichotomus</i>",
"doi": "https://doi.org/10.1101/2022.01.10.475740",
"year": 2022,
"citations": 1
},
"url": "http://www.insect.nibb.info/trydi/jb/",
"img": "8.png",
"width": 1182,
"height": 463
},
{
"name": "Atlantic chub mackerel browser",
"url": "http://portugalfishomics.ciimar.up.pt/app/scombercolias/",
"img": "9.png",
"pub": {
"doi": "https://doi.org/10.46471/gigabyte.40",
"title": "A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource",
"year": 2022,
"citations": 3
},
"width": 1369,
"height": 677
},
{
"name": "Arabidopsis transposon discovery with Nanotei pipeline",
"pub": {
"title": "Transposons Hidden in Arabidopsis thaliana Genome Assembly Gaps and Mobilization of Non-Autonomous LTR Retrotransposons Unravelled by Nanotei Pipeline",
"doi": "https://doi.org/10.3390/plants10122681",
"year": 2021,
"citations": 9
},
"img": "6.png",
"width": 1460,
"height": 1358
},
{
"name": "Serratus - Petabase scale viral discovery",
"pub": {
"title": "Petabase-scale sequence alignment catalyses viral discovery",
"doi": "https://doi.org/10.1038/s41586-021-04332-2",
"year": 2022,
"citations": 230
},
"url": "https://www.serratus.io/jbrowse?bam=ERR2756788",
"img": "7.png",
"width": 1182,
"height": 463
},
{
"name": "TCMPG - Traditional Chinese medicinal plant genome database",
"pub": {
"title": "TCMPG: an integrative database for traditional Chinese medicine plant genomes",
"doi": "https://doi.org/10.1093/hr/uhac060",
"year": 2022,
"citations": 17
},
"url": "http://cbcb.cdutcm.edu.cn/TCMPG/",
"img": "5.png",
"width": 1134,
"height": 697
},
{
"name": "S. pombe to cavanine (PomBase)",
"pub": {
"title": "Canavanine resistance mutation can1-1 in Schizosaccharomyces pombe is a missense mutation in the ubiquitin ligase adaptor gene any1",
"doi": "https://dx.doi.org/10.17912/micropub.biology.000538"
},
"url": "https://www.ncbi.nlm.nih.gov/core/lw/2.0/html/tileshop_pmc/tileshop_pmc_inline.html?title=Click%20on%20image%20to%20zoom&p=PMC3&id=8922049_25789430-2022-micropub.biology.000538.jpg",
"img": "4.png",
"width": 874,
"height": 842
},
{
"name": "Black carpenter ant genome assembly",
"pub": {
"title": "<i>De novo</i>sequencing, diploid assembly, and annotation of the black carpenter ant,<i>Camponotus pennsylvanicus</i>, and its symbionts by one person for $1000, using nanopore sequencing",
"doi": "https://doi.org/10.1093/nar/gkac510",
"year": 2022,
"citations": 17
},
"img": "3.png",
"width": 520,
"height": 624
},
{
"name": "Methylation profiling in cereal crops",
"pub": {
"doi": "https://doi.org/10.3390/plants11010005",
"title": "Searching for a Needle in a Haystack: Cas9-Targeted Nanopore Sequencing and DNA Methylation Profiling of Full-Length Glutenin Genes in a Big Cereal Genome",
"year": 2021,
"citations": 8
},
"img": "2.png",
"width": 798,
"height": 1136
},
{
"name": "PhaeoEpiView - Diatom epigenome browser",
"pub": {
"doi": "https://doi.org/10.1101/2022.07.29.502047",
"title": "PhaeoEpiView: An epigenome browser of the newly assembled genome of the model diatom <i>Phaeodactylum tricornutum</i>",
"year": 2022,
"citations": 1
},
"img": "1.png",
"width": 846,
"height": 720
},
{
"pub": {
"doi": "https://doi.org/10.12688/f1000research.123591.1",
"year": 2022,
"title": "Squalomix: shark and ray genome analysis consortium and its data sharing platform",
"citations": 13
},
"img": "11.png",
"name": "Squalomix - shark and ray comparative genomics",
"width": 1855,
"height": 1376
},
{
"pub": {
"doi": "https://doi.org/10.1101/2022.09.21.508858",
"year": 2022,
"title": "FishSCT: a zebrafish-centric database for exploration and visualization of fish single-cell transcriptome",
"citations": 0
},
"name": "FishSCT: zebrafish centric single-cell transcriptome database",
"img": "12.png",
"width": 877,
"height": 797
},
{
"pub": {
"doi": "https://doi.org/10.1093/nar/gkac936",
"year": 2022,
"title": "IAnimal: a cross-species omics knowledgebase for animals",
"citations": 7
},
"name": "IAnimal: a cross-species omics knowledgebase for animals",
"img": "13.png",
"width": 842,
"height": 534
},
{
"pub": {
"doi": "https://doi.org/10.1093/nar/gkac1017",
"year": 2022,
"title": "GWAS Central: an expanding resource for finding and visualising genotype and phenotype data from genome-wide association studies",
"citations": 15
},
"name": "GWAS Central",
"img": "14.png",
"width": 1117,
"height": 704
},
{
"pub": {
"doi": "https://doi.org/10.1093/bioinformatics/btac772",
"year": 2022,
"title": "Treenome Browser: co-visualization of enormous phylogenies and millions of genomes",
"citations": 5
},
"name": "The Treenome Browser",
"img": "15.jpeg",
"width": 1810,
"height": 777
}
]
}