-
Notifications
You must be signed in to change notification settings - Fork 6
/
Allocation_of_memory.c
326 lines (267 loc) · 17.6 KB
/
Allocation_of_memory.c
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
/*
Copyright (C) 2003 The GeoFramework Consortium
This file is part of Ellipsis3D.
Ellipsis3D is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License, version 2,
as published by the Free Software Foundation.
Ellipsis3D is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
Authors:
Louis Moresi <[email protected]>
Richard Albert <[email protected]>
*/
#include <string.h>
#include <math.h>
#include "element_definitions.h"
#include "global_defs.h"
/* ===================================
Functions which set up details
common to all problems follow ...
=================================== */
void allocate_common_vars(
struct All_variables *E
)
{
int i,j,l;
int elx,ely,nxyz;
const int dims=E->mesh.nsd;
const int dofs=E->mesh.dof;
const int ends=enodes[dims];
const int max_node = max_node_interaction[dims];
E->mesh.fnodal_malloc_size = (E->mesh.nno+2)*sizeof(standard_precision);
E->F = (standard_precision *) Malloc0((dofs*E->mesh.nno+1)*sizeof(standard_precision));
E->Fb = (standard_precision *) Malloc0((dofs*E->mesh.nno+1)*sizeof(standard_precision));
E->Q = (standard_precision *) Malloc0((E->mesh.npno+1)*sizeof(standard_precision));
E->mass = (standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
E->trmass = (standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
E->Have.T = (standard_precision *) Malloc0((E->mesh.noz+1)*sizeof(standard_precision));
E->Have.Vi = (standard_precision *) Malloc0((E->mesh.noz+1)*sizeof(standard_precision));
E->Have.vrms = (standard_precision *) Malloc0((E->mesh.noz+1)*sizeof(standard_precision));
E->Have.strs = (standard_precision *) Malloc0((E->mesh.noz+1)*sizeof(standard_precision));
E->Have.buoy = (standard_precision *) Malloc0((E->mesh.noz+1)*sizeof(standard_precision));
E->Have.Pres = (standard_precision *) Malloc0((E->mesh.noz+1)*sizeof(standard_precision));
E->T = (standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
E->nQ = (standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
E->edot = (standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
E->strs = (standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
E->strd = (standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
E->strd1 = (standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
E->depl = (standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
/*RAA: 24/09/02, depl is melting stuff by C. O'Neill */
memset(E->T,0,(E->mesh.nno+1)*sizeof(standard_precision));
memset(E->nQ,0,(E->mesh.nno+1)*sizeof(standard_precision));
memset(E->edot,0,(E->mesh.nno+1)*sizeof(standard_precision));
memset(E->strs,0,(E->mesh.nno+1)*sizeof(standard_precision));
memset(E->strd,0,(E->mesh.nno+1)*sizeof(standard_precision));
memset(E->strd1,0,(E->mesh.nno+1)*sizeof(standard_precision));
memset(E->depl,0,(E->mesh.nno+1)*sizeof(standard_precision));
if(2==E->mesh.nsd)
E->Psi=(standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
for(i=1;i<=E->mesh.nno;i++)
E->T[i] = 0.0;
E->Pstrain = (standard_precision *) Malloc0((E->mesh.nno+1)*sizeof(standard_precision));
for(i=1;i<=dofs;i++) {
E->Have.V[i] = (standard_precision *) Malloc0((E->mesh.noz+1)*sizeof(standard_precision));
E->V[i] = (standard_precision *) Malloc0( (E->mesh.nno+2)*sizeof(standard_precision) );
E->V1[i] = (standard_precision *) Malloc0( (E->mesh.nno+2)*sizeof(standard_precision) );
E->VB[i] = (standard_precision *) Malloc0( (E->mesh.nno+2)*sizeof(standard_precision) );
}
for(i=1;i<=dims;i++) {
E->x[i] = (standard_precision *) Malloc0((E->mesh.nno+2)*sizeof(standard_precision));
E->sx[i] = (standard_precision *) Malloc0((E->mesh.nno+2)*sizeof(standard_precision));
}
if(E->control.SPHERE || E->control.CYLINDER) {
for(i=1;i<=dofs;i++)
E->sv[i] = (standard_precision *) Malloc0((E->mesh.nno+2)*sizeof(standard_precision));
for(i=E->mesh.levmin;i<=E->mesh.levmax;i++) {
E->curvilinear.cosph[i] = (standard_precision *) Malloc0((E->mesh.nox+2)*sizeof(standard_precision));
E->curvilinear.sinph[i] = (standard_precision *) Malloc0((E->mesh.nox+2)*sizeof(standard_precision));
if(E->control.SPHERE) {
E->curvilinear.sint[i] = (standard_precision *) Malloc0((E->mesh.noy+2)*sizeof(standard_precision));
E->curvilinear.cost[i] = (standard_precision *) Malloc0((E->mesh.noy+2)*sizeof(standard_precision));
}
}
}
else {
for(i=1;i<=dofs;i++)
E->sv[i] = E->V[i];
}
E->TB = (standard_precision *) Malloc0( (E->mesh.nno+2)*sizeof(standard_precision) );
E->Bpi = (higher_precision *)Malloc0((E->mesh.npno+1)*sizeof(higher_precision));
E->eco = (struct COORD *) Malloc0((E->mesh.nno+2)*sizeof(struct COORD));
E->ien = (struct IEN *) Malloc0((E->mesh.nno+2)*sizeof(struct IEN));
E->ienp = (struct IEN *) Malloc0((E->mesh.nno+2)*sizeof(struct IEN));
E->id = (struct ID *) Malloc0((E->mesh.nno+2)*sizeof(struct ID));
E->elem = (struct ELEMENT *) Malloc0((E->mesh.nno+2)*sizeof(struct ELEMENT));
E->node = (unsigned int *) Malloc0((E->mesh.nno+2)*sizeof(unsigned int));
E->tw = (standard_precision *) Malloc0((E->mesh.nno+2)*sizeof(standard_precision));
E->Bi = (higher_precision *) Malloc0((E->mesh.nno+2)*sizeof(higher_precision));
E->idd = (struct ID *) Malloc0((E->mesh.NNO[E->mesh.levmin]+1)*sizeof(struct ID));
/* Aliases for functions only interested in the highest mg level */
E->ECO[E->mesh.levmax] = E->eco;
E->IEN[E->mesh.levmax]=E->ien;
E->IENP[E->mesh.levmax]=E->ienp;
E->ID[E->mesh.levmax]=E->id;
E->NODE[E->mesh.levmax]=E->node;
E->TW[E->mesh.levmax]=E->tw;
E->BI[E->mesh.levmax]=E->Bi;
E->ELEM[E->mesh.levmax]=E->elem;
E->NQ[E->mesh.levmax]=E->nQ;
for(i=1;i<=dims;i++) {
E->X[E->mesh.levmax][i]=E->x[i];
E->SX[E->mesh.levmax][i]=E->sx[i];
}
for(i=1;i<=dofs;i++) {
E->VV[E->mesh.levmax][i] = E->V[i];
E->Vb[i][E->mesh.levmax] = E->VB[i];
}
E->BPI[E->mesh.levmax] = E->Bpi;
E->QQ[E->mesh.levmax] = E->Q;
E->FF[E->mesh.levmax] = E->F;
E->FFb[E->mesh.levmax] = E->Fb;
E->Mass[E->mesh.levmax] = E->mass;
E->Trmass[E->mesh.levmax] = E->trmass;
E->Tb[E->mesh.levmax] = E->TB;
/* These things are defined in multigrid and have high level aliases already allocated*/
for(i=E->mesh.levmin;i<E->mesh.levmax;i++) {
E->ECO[i] = (struct COORD *) Malloc0((E->mesh.NNO[i]+2)*sizeof(struct COORD));
E->IEN[i] = (struct IEN *) Malloc0((E->mesh.NNO[i]+2)*sizeof(struct IEN));
E->IENP[i] = (struct IEN *) Malloc0((E->mesh.NNO[i]+2)*sizeof(struct IEN));
E->ID[i] = (struct ID *) Malloc0((E->mesh.NNO[i]+2)*sizeof(struct ID));
E->ELEM[i] = (struct ELEMENT *) Malloc0((E->mesh.NNO[i]+2)*sizeof(struct ELEMENT));
E->NODE[i] = (unsigned int *) Malloc0((E->mesh.NNO[i]+2)*sizeof(unsigned int));
E->TW[i] = (standard_precision *) Malloc0((E->mesh.NNO[i]+2)*sizeof(standard_precision));
E->BPI[i] = (higher_precision *) Malloc0((E->mesh.NPNO[i]+2)*sizeof(higher_precision));
E->NQ[i] = (standard_precision *)Malloc0((E->mesh.NNO[i]+2)*sizeof(standard_precision));
E->QQ[i] = (standard_precision *)Malloc0((E->mesh.NPNO[i]+2)*sizeof(standard_precision));
E->FF[i] = (standard_precision *)Malloc0((E->mesh.NNO[i]*dofs+2)*sizeof(standard_precision));
E->FFb[i] = (standard_precision *)Malloc0((E->mesh.NNO[i]*dofs+2)*sizeof(standard_precision));
E->Tb[i]=(standard_precision *)Malloc0((E->mesh.NNO[i]+2)*sizeof(standard_precision));
E->Mass[i] = (standard_precision *)Malloc0((E->mesh.NNO[i]+2)*sizeof(standard_precision));
E->Trmass[i] = (standard_precision *)Malloc0((E->mesh.NNO[i]+2)*sizeof(standard_precision));
for(j=1;j<=dims;j++) {
E->X[i][j]=(standard_precision *)Malloc0((E->mesh.NNO[i]+2)*sizeof(standard_precision));
E->SX[i][j]=(standard_precision *)Malloc0((E->mesh.NNO[i]+2)*sizeof(standard_precision));
}
for(j=1;j<=dofs;j++) {
E->VV[i][j]=(standard_precision *)Malloc0((E->mesh.NNO[i]+2)*sizeof(standard_precision));
E->Vb[j][i]=(standard_precision *)Malloc0((E->mesh.NNO[i]+2)*sizeof(standard_precision));
}
}
/* Curvilinear case, boundary condition rotation matrices */
for(i=E->mesh.levmin;i<=E->mesh.levmax;i++)
E->curvilinear.NODE_R[i] = (higher_precision **)Malloc0((E->mesh.NNO[i]+1) * sizeof(higher_precision *));
E->curvilinear.node_r = E->curvilinear.NODE_R[E->mesh.levmax];
/* These things are unique to multigrid */
for(i=E->mesh.levmin;i<=E->mesh.levmax;i++) {
E->EL[i] = (struct SUBEL *) Malloc0((E->mesh.NEL[i]+2)*sizeof(struct SUBEL));
E->NEI[i].nels = (int *) Malloc0((E->mesh.NNO[i]+2)*sizeof(int));
E->NEI[i].lnode = (int *) Malloc0((E->mesh.NNO[i]+2)*enodes[E->mesh.nsd]*sizeof(int));
E->NEI[i].element = (int *) Malloc0((E->mesh.NNO[i]+2)*enodes[E->mesh.nsd]*sizeof(int));
E->index[i] = (int *) Malloc0((E->mesh.NNO[i]+2)*sizeof(int));
/* E->update_elt_k[i] = (char *) Malloc0((E->mesh.NEL[i]+2)*sizeof(struct char)); */
E->elt_del[i]=(struct EG *)Malloc0((E->mesh.NEL[i]+1)*sizeof(struct EG));
E->Node_k11[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k21[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k12[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k22[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->BI[i] = (higher_precision *) Malloc0((E->mesh.NNO[i]*dofs+2)*sizeof(higher_precision));
E->BI1[i] = (higher_precision *) Malloc0((E->mesh.NNO[i]+1)*sizeof(higher_precision));
E->BI2[i] = (higher_precision *) Malloc0((E->mesh.NNO[i]+1)*sizeof(higher_precision));
if(dofs==3) {
E->Node_k31[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k32[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k13[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k23[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k33[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->BI3[i] = (higher_precision *) Malloc0((E->mesh.NNO[i]+10)*sizeof(higher_precision));
}
else if(dofs==6) {
E->Node_k13[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k14[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k15[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k16[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k23[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k24[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k25[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k26[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k31[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k32[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k33[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k34[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k35[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k36[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k41[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k42[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k43[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k44[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k45[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k46[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k51[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k52[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k53[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k54[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k55[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k56[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k61[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k62[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k63[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k64[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k65[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->Node_k66[i] = (higher_precision *) Malloc0((E->mesh.NNO[i] +2) * max_node * sizeof(higher_precision));
E->BI3[i] = (higher_precision *) Malloc0((E->mesh.NNO[i]+1)*sizeof(higher_precision));
E->BI4[i] = (higher_precision *) Malloc0((E->mesh.NNO[i]+1)*sizeof(higher_precision));
E->BI5[i] = (higher_precision *) Malloc0((E->mesh.NNO[i]+1)*sizeof(higher_precision));
E->BI6[i] = (higher_precision *) Malloc0((E->mesh.NNO[i]+1)*sizeof(higher_precision));
}
E->Node_map_3[i] = (int *) Malloc0((E->mesh.NNO[i]+5) * max_node * sizeof(int));
E->control.B_is_good[i] = 0;
}
for(l=E->mesh.levmin;l<=E->mesh.levmax;l++) {
for(i=1;i<=E->mesh.NNO[l];i++) {
E->NODE[l][i] = (INTX | INTY | INTZ); /* and any others ... */
E->curvilinear.NODE_R[l][i] = (higher_precision *) NULL;
E->NQ[l][i] = 0.0;
E->TW[l][i]= 0.0;
E->Tb[l][i] = 0.0;
for(j=1;j<=dofs;j++) {
E->Vb[j][l][i] = 0.0;
E->VV[l][j][i] = 0.0;
}
for(j=1;j<=dims;j++) {
E->X[l][j][i] = 0.0;
}
}
for(i=1;i<=E->mesh.NPNO[l];i++)
E->QQ[l][i] = 0.0;
}
return;
}
void allocate_observables_storage(
struct All_variables *E
)
{
E->slice.tpg = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.tpgb = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.tpgk = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.tpgbk = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.grv = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.geo = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.grvb = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.grvt = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.geob = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.geot = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.grvk = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.geok = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.grvbk = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.grvtk = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.geobk = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.geotk = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.shflux = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.bhflux = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.vxsurf[1] = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.vxsurf[2] = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
E->slice.vxsurf[3] = (standard_precision *)Malloc0((E->mesh.nox * E->mesh.noy+2)*sizeof(standard_precision));
}