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@oesteban I'm running into the same error with our hcph-pilot data, a deep sampling dataset with 16 sessions on a single individual.
At first, I wondered whether this error was a consequence of running only the anatomical workflow and then the dwi workflow. But given that @josephmje seemed to face it with subjects also scanned on a Siemens Prisma, maybe it's a problem of dMRIPrep being unable to handle data from this scanner.
Description
N4BiasFieldCorrections fails on a subset of participants in one dataset that I've been testing. The subjects were all scanned on a Siemens Prisma.
What I Did
When running with the
--verbose
flag, I get the following error:The text was updated successfully, but these errors were encountered: