Remove DiffEqFlux, update Manifest

Manifest.toml

@@ -2,7 +2,7 @@
 
 julia_version = "1.10.0-DEV"
 manifest_format = "2.0"
-project_hash = "474069c22bfebd8308e6c21701a92c98f821b8e5"
+project_hash = "71912c6345c537893b03f7010947cabcff93c14c"
 
 [[deps.ARFFFiles]]
 deps = ["CategoricalArrays", "Dates", "Parsers", "Tables"]
@@ -27,10 +27,10 @@ weakdeps = ["ChainRulesCore"]
     AbstractFFTsChainRulesCoreExt = "ChainRulesCore"
 
 [[deps.AbstractMCMC]]
-deps = ["BangBang", "ConsoleProgressMonitor", "Distributed", "Logging", "LoggingExtras", "ProgressLogging", "Random", "StatsBase", "TerminalLoggers", "Transducers"]
-git-tree-sha1 = "5dfb2514d115b449127f29eb7b3272c5528d396e"
+deps = ["BangBang", "ConsoleProgressMonitor", "Distributed", "LogDensityProblems", "Logging", "LoggingExtras", "ProgressLogging", "Random", "StatsBase", "TerminalLoggers", "Transducers"]
+git-tree-sha1 = "a21654aa796bcc993284dace0d17d1022774c0a3"
 uuid = "80f14c24-f653-4e6a-9b94-39d6b0f70001"
-version = "3.3.1"
+version = "4.4.1"
 
 [[deps.AbstractTrees]]
 git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c"
@@ -1536,10 +1536,16 @@ version = "1.42.0"
     HYPRE = "b5ffcf37-a2bd-41ab-a3da-4bd9bc8ad771"
 
 [[deps.Loess]]
-deps = ["Distances", "LinearAlgebra", "Statistics"]
-git-tree-sha1 = "46efcea75c890e5d820e670516dc156689851722"
+deps = ["Distances", "LinearAlgebra", "Statistics", "StatsAPI"]
+git-tree-sha1 = "9d6df360b25c452d7f98ebde57b7a84e9b6b8f67"
 uuid = "4345ca2d-374a-55d4-8d30-97f9976e7612"
-version = "0.5.4"
+version = "0.6.0"
+
+[[deps.LogDensityProblems]]
+deps = ["ArgCheck", "DocStringExtensions", "Random"]
+git-tree-sha1 = "f9a11237204bc137617194d79d813069838fcf61"
+uuid = "6fdf6af0-433a-55f7-b3ed-c6c6e0b8df7c"
+version = "2.1.1"
 
 [[deps.LogExpFunctions]]
 deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"]
@@ -1558,9 +1564,9 @@ uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
 
 [[deps.LoggingExtras]]
 deps = ["Dates", "Logging"]
-git-tree-sha1 = "5d4d2d9904227b8bd66386c1138cf4d5ffa826bf"
+git-tree-sha1 = "cedb76b37bc5a6c702ade66be44f831fa23c681e"
 uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36"
-version = "0.4.9"
+version = "1.0.0"
 
 [[deps.LoopVectorization]]
 deps = ["ArrayInterface", "ArrayInterfaceCore", "CPUSummary", "CloseOpenIntervals", "DocStringExtensions", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"]
@@ -1696,9 +1702,9 @@ version = "1.8.0"
 
 [[deps.MLJModels]]
 deps = ["CategoricalArrays", "CategoricalDistributions", "Combinatorics", "Dates", "Distances", "Distributions", "InteractiveUtils", "LinearAlgebra", "MLJModelInterface", "Markdown", "OrderedCollections", "Parameters", "Pkg", "PrettyPrinting", "REPL", "Random", "RelocatableFolders", "ScientificTypes", "StatisticalTraits", "Statistics", "StatsBase", "Tables"]
-git-tree-sha1 = "21acf47dc53ccc3d68e38ac7629756cd09b599f5"
+git-tree-sha1 = "6a1166e463cf0210364e84f334c79ecf9ac6f51f"
 uuid = "d491faf4-2d78-11e9-2867-c94bc002c0b7"
-version = "0.16.6"
+version = "0.16.7"
 
 [[deps.MLJTuning]]
 deps = ["ComputationalResources", "Distributed", "Distributions", "LatinHypercubeSampling", "MLJBase", "ProgressMeter", "Random", "RecipesBase"]
@@ -2083,10 +2089,10 @@ uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
 version = "1.6.0"
 
 [[deps.OrdinaryDiffEq]]
-deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SimpleNonlinearSolve", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "UnPack"]
-git-tree-sha1 = "a364df19a43c4a9520eeca693aa2e77b679a2b0c"
+deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SimpleNonlinearSolve", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces", "UnPack"]
+git-tree-sha1 = "d875f5fa389e8a35fb2ae8f39326cc97815d1075"
 uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
-version = "6.47.0"
+version = "6.49.0"
 
 [[deps.P4est]]
 deps = ["CEnum", "MPI", "MPIPreferences", "P4est_jll", "Preferences", "Reexport", "UUIDs"]
@@ -2119,9 +2125,9 @@ version = "0.3.17"
 
 [[deps.PSIS]]
 deps = ["LinearAlgebra", "LogExpFunctions", "Printf", "RecipesBase", "Statistics"]
-git-tree-sha1 = "735ec7b55fd84908df42907bb56ff272c117c85a"
+git-tree-sha1 = "72a16ef4d76e0cb071d704ff50dc086b6715d2f9"
 uuid = "ce719bf2-d5d0-4fb9-925d-10a81b42ad04"
-version = "0.6.0"
+version = "0.7.2"
 
 [[deps.Packing]]
 deps = ["GeometryBasics"]
@@ -2149,9 +2155,9 @@ version = "0.7.4"
 
 [[deps.Parsers]]
 deps = ["Dates", "PrecompileTools", "UUIDs"]
-git-tree-sha1 = "7302075e5e06da7d000d9bfa055013e3e85578ca"
+git-tree-sha1 = "a5aef8d4a6e8d81f171b2bd4be5265b01384c74c"
 uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
-version = "2.5.9"
+version = "2.5.10"
 
 [[deps.PathIntersections]]
 deps = ["ForwardDiff", "GaussQuadrature", "LinearAlgebra", "SparseArrays", "StaticArrays", "StructArrays"]
@@ -2961,10 +2967,10 @@ uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999"
 version = "0.4.76"
 
 [[deps.TransformVariables]]
-deps = ["ArgCheck", "ChangesOfVariables", "DocStringExtensions", "ForwardDiff", "InverseFunctions", "LinearAlgebra", "LogExpFunctions", "Pkg", "Random", "UnPack"]
-git-tree-sha1 = "4709729bd958fecb512d3d95cb41bed92f095ef5"
+deps = ["ArgCheck", "ChangesOfVariables", "DocStringExtensions", "ForwardDiff", "InverseFunctions", "LinearAlgebra", "LogExpFunctions", "Pkg", "Random", "StaticArrays", "UnPack"]
+git-tree-sha1 = "82b9ba404edd9f3c09c1576bb493e87159ffc28d"
 uuid = "84d833dd-6860-57f9-a1a7-6da5db126cff"
-version = "0.7.1"
+version = "0.8.6"
 
 [[deps.Trapz]]
 git-tree-sha1 = "79eb0ed763084a3e7de81fe1838379ac6a23b6a0"

Project.toml

@@ -1,7 +1,7 @@
 name = "OmniPackage"
 uuid = "992a9bcd-042f-40bc-a011-a3ea62fdd9b8"
 authors = ["Chris Elrod <[email protected]> and contributors"]
-version = "0.1.3"
+version = "0.1.4"
 
 [deps]
 AbstractMCMC = "80f14c24-f653-4e6a-9b94-39d6b0f70001"
@@ -122,7 +122,6 @@ DataFrames = "1.4"
 DataInterpolations = "3.0, 4"
 DataStructures = "0.18"
 DiffEqBase = "= 6.120.0"
-DiffEqFlux = "1, 2"
 DiffResults = "1.0"
 DifferentialEquations = "7"
 DistributedArrays = "0.6"