Update jacodb and refine dataflow accordingly

[Lipen]

This PR updates jacodb to the latest neo branch version and also fixes/improves dataflow accordingly to API changes in jacodb.

Also a major change is that Traits now contain only functions. The reason for this is that functions look much more consistent than a combination of extension properties and functions.

[Lipen]

@CaelmBleidd should we also rename usvm-jvm-dataflow to a more logical usvm-dataflow-jvm (JVM-specific dataflow) in this PR, since we are going to add usvm-dataflow-ts in the future? Or we need a separate PR for this?

[Saloed]

Initialization failed in many tests:

JcCallGraphStatisticsTests > initializationError FAILED
    java.lang.IllegalStateException at JcCallGraphStatisticsTests.kt:14

[Lipen]

This extension requires `Usages` feature to be installed
java.lang.IllegalStateException: This extension requires `Usages` feature to be installed
	at org.jacodb.impl.features.JcUsages.usagesExt(UsagesExtension.kt:140)
	at org.usvm.machine.JcApplicationGraph$jcApplicationGraph$1.invokeSuspend(JcApplicationGraph.kt:21)
	at kotlin.coroutines.jvm.internal.BaseContinuationImpl.resumeWith(ContinuationImpl.kt:33)
	at kotlinx.coroutines.DispatchedTask.run(DispatchedTask.kt:106)
	at kotlinx.coroutines.EventLoopImplBase.processNextEvent(EventLoop.common.kt:284)
	at kotlinx.coroutines.BlockingCoroutine.joinBlocking(Builders.kt:85)
	at kotlinx.coroutines.BuildersKt__BuildersKt.runBlocking(Builders.kt:59)
	at kotlinx.coroutines.BuildersKt.runBlocking(Unknown Source)
	at kotlinx.coroutines.BuildersKt__BuildersKt.runBlocking$default(Builders.kt:38)
	at kotlinx.coroutines.BuildersKt.runBlocking$default(Unknown Source)
	at org.usvm.machine.JcApplicationGraph.<init>(JcApplicationGraph.kt:21)
	at org.usvm.machine.JcCallGraphStatisticsTests.<init>(JcCallGraphStatisticsTests.kt:14)
...

suspend fun JcClasspath.usagesExt(): SyncUsagesExtension {
    if (!db.isInstalled(Usages)) {
        throw IllegalStateException("This extension requires `Usages` feature to be installed")
    }
    return SyncUsagesExtension(hierarchyExt(), this)
}

[Lipen]

Seems like cp: JcClasspath that is passed to JcApplicationGraphImpl in tests is actually from the JacoDBContainer, where only InMemoryHierarchy feature is installed. I've added Usages feature here, tests pass locally (except the approximation tests, as expected), but probably @Saloed have to double-check whether it is correct.